Forskning ved Københavns Universitet - Københavns Universitet

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Marleen de Bruijne

Marleen de Bruijne

Professor

Medlem af:

Marleen de Bruijne is associate professor of medical image analysis at  <a href="http://www.bigr.nl/">Erasmus MC - University Medical Center Rotterdam, The Netherlands</a>, and professor of medical image analysis at University of Copenhagen, Denmark. She received an MSc degree in physics (1997) and a PhD degree in medical imaging (2003) both from Utrecht University, The Netherlands. Before joining the University of Copenhagen (2007) and Erasmus MC (2008) she was assistant professor and later associate professor at the IT University of Copenhagen. Marleen has (co-)authored 180 peer-reviewed full papers in international conferences and journals and 19 patent applications. She has been a member of the program committee of many international conferences in medical imaging and computer vision, associate editor for Image and Vision Computing and Medical Physics, and is a member of the IPMI board, the ISBI Steering Committee, and of the editorial boards of Medical Image Analysis and Frontiers in ICT - Computer Image Analysis.  Her research interest is in quantitative analysis of medical images, with a focus on machine learning techniques and with applications in pulmonary imaging, neuro imaging, and cardiovascular imaging.

 

Udvalgte publikationer

  1. Accepteret/In press

    Transfer Learning for Image Segmentation by Combining Image Weighting and Kernel Learning

    van Opbroek, A., Achterberg, H. C., Vernooij, M. W. & de Bruijne, M. 25 jul. 2018 (Accepteret/In press) I : IEEE transactions on medical imaging.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  2. Udgivet

    Mean field network based graph refinement with application to airway tree extraction

    Raghavendra, S., Welling, M., Pedersen, J. J. H., Petersen, J. & de Bruijne, M. 2018 21st Conference on Medical Image Computing & Computer Assisted Intervention (MICCAI 2018), Grenada, Spain.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  3. Udgivet

    Detecting emphysema with multiple instance learning

    Orting, S. N., Petersen, J., Thomsen, L. H., Wille, M. M. W. & De Bruijne, M. 23 maj 2018 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society Press, Bind 2018-April, s. 510-513 4 s.

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  4. Udgivet

    Maximization of regional probabilities using Optimal Surface Graphs: Application to carotid artery segmentation in MRI

    Arias Lorza, A. M., Van Engelen, A., Petersen, J., Van Der Lugt, A. & De Bruijne, M. 1 mar. 2018 I : Medical Physics. 45, 3, s. 1159-1169 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  5. Udgivet

    Transfer learning for multicenter classification of chronic obstructive pulmonary disease

    Cheplygina, V., Peña, I. P., Pedersen, J. J. H., Lynch, D. A., Sørensen, L. & de Bruijne, M. sep. 2018 I : IEEE Journal of Biomedical and Health Informatics. 22, 5, s. 1486 - 1496

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  6. Udgivet

    Diagnosis of bronchiectasis and airway wall thickening in children with cystic fibrosis: objective airway-artery quantification

    Kuo, W., de Bruijne, M., Petersen, J., Nasserinejad, K., Ozturk, H., Chen, Y., Perez-Rovira, A. & Tiddens, H. A. W. M. nov. 2017 I : European Radiology. 27, 11, s. 4680-4689 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  7. Udgivet

    Segmentation of intracranial arterial calcification with deeply supervised residual dropout networks

    Bortsova, G., van Tulder, G., Dubost, F., Peng, T., Navab, N., van der Lugt, A., Bos, D. & de Bruijne, M. 2017 Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017: 20th International Conference, Quebec City, QC, Canada, September 11-13, 2017, Proceedings, Part III. Descoteaux, M., Maier-Hein, L., Franz, A., Jannin, P., Collins, D. L. & Duchesne, S. (red.). Springer, s. 356-364 9 s. (Lecture Notes in Computer Science, Bind 10435).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  8. Udgivet

    Extraction of airways with probabilistic state-space models and Bayesian smoothing

    Raghavendra, S., Petersen, J., Pedersen, J. J. H. & de Bruijne, M. 2017 Graphs in Biomedical Image Analysis, Computational Anatomy and Imaging Genetics: First International Workshop, GRAIL 2017, 6th International Workshop, MFCA 2017, and Third International Workshop, MICGen 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Ferrante, E., Pennec, X., Dalca, A. V., Parisot, S., Joshi, S., Batmanghelich, N. K., Sotiras, A., Nielsen, M., Sabuncu, M. R., Fletcher, T., Shen, L., Durrleman, S. & Sommer, S. (red.). Springer, s. 53-63 11 s. (Lecture Notes in Computer Science, Bind 10551).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  9. Udgivet

    GP-Unet: Lesion detection from weak labels with a 3D regression network

    Dubost, F., Bortsova, G., Adams, H., Ikram, A., Niessen, W. J., Vernooij, M. & de Bruijne, M. 2017 Medical Image Computing and Computer-Assisted Intervention − MICCAI 2017: 20th International Conference, Quebec City, QC, Canada, September 11-13, 2017, Proceedings, Part III. Descoteaux, M., Maier-Hein, L., Franz, A., Jannin, P., Collins, D. L. & Duschesne, S. (red.). Springer, s. 214-221 8 s. (Lecture Notes in Computer Science, Bind 10435).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  10. Udgivet

    Crowdsourced emphysema assessment

    Ørting, S. N., Cheplygina, V., Petersen, J., Thomsen, L. H., Wille, M. M. W. & de Bruijne, M. 2017 Intravascular Imaging and Computer Assisted Stenting, and Large-Scale Annotation of Biomedical Data and Expert Label Synthesis: 6th Joint International Workshops, CVII-STENT 2017 and Second International Workshop, LABELS 2017, Held in Conjunction with MICCAI 2017, Québec City, QC, Canada, September 10–14, 2017, Proceedings. Cardoso, M. J., Arbel, T., Lee, S-L., Cheplygina, V., Balocco, S., Mateus, D., Zahnd, G., Maier-Hein, L., Dermirci, S., Granger, E., Duong, L., Carbonneau, M-A., Albarquoni, S. & Carneiro, G. (red.). Springer, s. 126-135 10 s. (Lecture Notes in Computer Science, Bind 10552).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  11. Udgivet

    Machine learning approaches in medical image analysis: from detection to diagnosis

    de Bruijne, M. 2016 I : Medical Image Analysis. 33, s. 94-97 4 s.

    Publikation: Bidrag til tidsskriftLederForskningfagfællebedømt

  12. Udgivet

    Automatic airway-artery analysis on lung CT to quantify airway wall thickening and bronchiectasis

    Perez-Rovira, A., Kuo, W., Petersen, J., Tiddens, H. A. W. M. & de Bruijne, M. 2016 I : Medical Physics. 43, 10, s. 5736-5744 9 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  13. Udgivet

    Representation learning for cross-modality classification

    Tulder, G. V. & de Bruijne, M. 2017 Medical Computer Vision and Bayesian and Graphical Models for Biomedical Imaging: MICCAI 2016 International Workshops, MCV and BAMBI, Athens, Greece, October 21, 2016, Revised Selected Papers. Müller, H., Kelm, B. M., Arbel, T., Cai, W., Cardoso, M. J., Langs, G., Menze, B., Metaxas, D., Montillo, A., Wells, W. M., Zhang, S., Chung, A. C. S., Jenkinson, M. & Ribbens, A. (red.). Springer, s. 126-136 11 s. (Lecture Notes in Computer Science, Bind 10081).

    Publikation: Bidrag til bog/antologi/rapportKonferencebidrag i proceedingsForskningfagfællebedømt

  14. Udgivet

    Weighting training images by maximizing distribution similarity for supervised segmentation across scanners

    van Opbroek, A., Vernooij, M. W., Ikram, M. A. & de Bruijne, M. 2015 I : Medical Image Analysis. 24, 1, s. 245-254 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  15. Udgivet

    Transfer learning improves supervised image segmentation across imaging protocols

    van Opbroek, A., Ikram, M. A., Vernooij, M. W. & de Bruijne, M. 2015 I : IEEE transactions on medical imaging. 34, 5, s. 1018-1030 13 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  16. Udgivet

    Geodesic atlas-based labeling of anatomical trees: application and evaluation on airways extracted from CT

    Feragen, A., Petersen, J., Owen, M., Lo, P., Thomsen, L. H., Wille, M. M. W., Dirksen, A. & de Bruijne, M. 2015 I : IEEE transactions on medical imaging. 34, 6, s. 1212-1226 15 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  17. Udgivet

    Three-dimensional carotid ultrasound plaque texture predicts vascular events

    van Engelen, A., Wannarong, T., Parraga, G., Niessen, W. J., Fenster, A., Spence, J. D. & de Bruijne, M. 2014 I : Stroke. 45, s. 2695-2701 7 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  18. Udgivet

    Optimal surface segmentation using flow lines to quantify airway abnormalities in chronic obstructive pulmonary disease

    Petersen, J., Nielsen, M., Lo, P. C. P., Nordenmark, L. H., Pedersen, J. J. H., Wille, M. M. W., Dirksen, A. & de Bruijne, M. 2014 I : Medical Image Analysis. 18, 3, s. 531-541 11 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  19. Udgivet

    Hippocampal shape is predictive for the development of dementia in a normal, elderly population

    Achterberg, H. C., van der Lijn, F., den Heijer, T., Vernooij, M. W., Ikram, M. A., Niessen, W. J. & de Bruijne, M. 2014 I : Human Brain Mapping. 35, 5, s. 2359-2371 13 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  20. Udgivet

    Extraction of airways from CT (EXACT’09)

    Lo, P. C. P., Ginneken, B. V., Reinhardt, J. M., Yavarna, T., Jong, P. A. D., Irving, B., Fetita, C., Ortner, M., Pinho, R., Sijbers, J., Feuerstein, M., Fabijanska, A., Bauer, C., Beichel, R., Mendoza, C. S., Wiemker, R., Lee, J., Reeves, A. P., Born, S., Weinheimer, O., Rikxoort, E. M. V., Tschirren, J., Mori, K., Odry, B., Naidich, D. P., Hartmann, I., Hoffman, E. A., Prokop, M., Pedersen, J. H. & de Bruijne, M. 2012 I : I E E E Transactions on Medical Imaging. 31, 11, s. 2093-2107 15 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  21. Udgivet

    Mass preserving image registration for lung CT

    Gorbunova, V., Sporring, J., Lo, P. C. P., Loeve, M., Tiddens, H. A., Nielsen, M., Dirksen, A. & de Bruijne, M. 2012 I : Medical Image Analysis. 16, 4, s. 786-795 10 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

  22. Udgivet

    Texture-based analysis of COPD: a data-driven approach

    Sørensen, L., Nielsen, M., Lo, P. C. P., Ashraf, H., Pedersen, J. J. H. & de Bruijne, M. 2012 I : I E E E Transactions on Medical Imaging. 31, 1, s. 70-78 9 s.

    Publikation: Bidrag til tidsskriftTidsskriftartikelForskningfagfællebedømt

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